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Cheap Flights from Crete Heraklion to Santorini (Thira)

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Compare Crete Heraklion to Santorini (Thira) flight deals

Find the cheapest month or even day of the year to fly to Santorini (Thira)

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Flight deals from Crete Heraklion to Santorini (Thira)

Looking for a cheap last-minute deal or the best return flight from Crete Heraklion to Santorini (Thira)? Find the lowest prices on one-way and return tickets right here.
Santorini (Thira).114 € per passenger.Departing Thu, 8 May, returning Mon, 12 May.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Crete Heraklion on Thu, 8 May, arriving in Santorini (Thira).Inbound indirect flight with SKY express, departs from Santorini (Thira) on Mon, 12 May, arriving in Crete Heraklion.Price includes taxes and charges.From 114 €, select.
Santorini (Thira).133 € per passenger.Departing Sat, 12 Apr, returning Thu, 1 May.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Crete Heraklion on Sat, 12 Apr, arriving in Santorini (Thira).Inbound indirect flight with SKY express, departs from Santorini (Thira) on Thu, 1 May, arriving in Crete Heraklion.Price includes taxes and charges.From 133 €, select.
Santorini (Thira).133 € per passenger.Departing Mon, 7 Apr, returning Thu, 24 Apr.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Crete Heraklion on Mon, 7 Apr, arriving in Santorini (Thira).Inbound indirect flight with SKY express, departs from Santorini (Thira) on Thu, 24 Apr, arriving in Crete Heraklion.Price includes taxes and charges.From 133 €, select.
Santorini (Thira).134 € per passenger.Departing Tue, 13 May, returning Sun, 1 Jun.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Crete Heraklion on Tue, 13 May, arriving in Santorini (Thira).Inbound indirect flight with SKY express, departs from Santorini (Thira) on Sun, 1 Jun, arriving in Crete Heraklion.Price includes taxes and charges.From 134 €, select.
Santorini (Thira).150 € per passenger.Departing Sun, 1 Jun, returning Sun, 1 Jun.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Crete Heraklion on Sun, 1 Jun, arriving in Santorini (Thira).Inbound indirect flight with SKY express, departs from Santorini (Thira) on Sun, 1 Jun, arriving in Crete Heraklion.Price includes taxes and charges.From 150 €, select.
Santorini (Thira).150 € per passenger.Departing Mon, 31 Mar, returning Thu, 3 Apr.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Crete Heraklion on Mon, 31 Mar, arriving in Santorini (Thira).Inbound indirect flight with SKY express, departs from Santorini (Thira) on Thu, 3 Apr, arriving in Crete Heraklion.Price includes taxes and charges.From 150 €, select.
Santorini (Thira).150 € per passenger.Departing Sun, 13 Jul, returning Sun, 3 Aug.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Crete Heraklion on Sun, 13 Jul, arriving in Santorini (Thira).Inbound indirect flight with SKY express, departs from Santorini (Thira) on Sun, 3 Aug, arriving in Crete Heraklion.Price includes taxes and charges.From 150 €, select.
Santorini (Thira).150 € per passenger.Departing Tue, 10 Jun, returning Tue, 1 Jul.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Crete Heraklion on Tue, 10 Jun, arriving in Santorini (Thira).Inbound indirect flight with SKY express, departs from Santorini (Thira) on Tue, 1 Jul, arriving in Crete Heraklion.Price includes taxes and charges.From 150 €, select.

Find the cheapest month to fly from Crete Heraklion to Santorini (Thira)

We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Crete Heraklion to Santorini (Thira) flights are currently cheapest in May.
Mar
from 160 €
Apr
from 133 €
May
from 114 €
Jun
from 150 €
Jul
from 150 €
Aug
from 150 €
Sep
from 165 €
Oct
from 163 €
Nov
Find prices
Dec
from 222 €
Jan
Find prices
Feb
Find prices

Direct flights from Crete Heraklion to Santorini (Thira)

Crete Heraklion to Santorini (Thira): Alternative routes

Compare routes from Crete Heraklion to Santorini (Thira) below. You may find an airport to fly into that's cheaper, faster, or easier than Santorini (Thira).

Heraklion to Santorini (Thira): Flight information

The things to know before you go.
Cheapest flight found114 €
Cheapest month to flyMay
Average flight time1 hr
Most popular airlineTuifly.be
Average flights per week1

Finding cheap flights from Crete Heraklion to Santorini (Thira): Frequently asked questions

The best price we found for a return flight from Crete Heraklion to Santorini (Thira) is 114 €. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.
1 hour is the average flight time from Crete Heraklion to Santorini (Thira).
Tuifly.be flies direct from Crete Heraklion to Santorini (Thira).
As of March 2025, there is one flight per week flying from Crete Heraklion to Santorini (Thira).
The cheapest month to fly from Crete Heraklion to Santorini (Thira) is usually March 2025.
After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Crete Heraklion Airport to Santorini (Thira) Airport on Thursday, 8 May 2025.
Yes – the average flight time is 1 hour.
We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to Santorini (Thira) but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.
We crunched all the numbers in our flight calendar and it looks like the cheapest time to book a flight to Santorini (Thira) is around 40 days in advance, so don’t leave your flight to the last minute.
Currently, SKY express offers the cheapest flight tickets to Santorini (Thira).

Travelling from Heraklion Airport (HER) to Santorini International Airport (JTR): what you need to know

  • Be prepared for longer queues during popular months such as August and other peak seasons. Arriving up to four hours in advance for an international flight and two hours for a domestic departure will help ensure a smooth travel experience.

  • If you'd like a stopover for your flight from Heraklion Airport to Santorini International Airport, simply deselect 'Direct flights only' and look at all your options. Here are the popular stopovers between HER and JTR:

    • Ben Gurion International Airport

    • Eleftherios Venizelos International Airport

    • Leonardo da Vinci-Fiumicino Airport

  • You don't need your passport or a visa to travel within Greece. You will need a valid form of identification however, like an ID card or driver's license. Make sure they're on your packing list once you've found cheap ticket from HER to JTR.

How to find the cheapest flights from Heraklion Airport (HER) to Santorini International Airport (JTR)

  • The lowest price we've found for a one-way ticket from Heraklion Airport to Santorini International Airport is 42 €. For a return flight on this route, the best price is 114 €. Depending on the availability when you book, these fares can change.

  • It's usually smart to book in advance if you're looking for cheap tickets from HER to JTR. That's because flight prices are based on demand, which tends to rise closer to the date of departure.

  • Finding cheap tickets from Heraklion Airport to Santorini International Airport is easy if you can be flexible with your travel dates. Use the 'Whole month' function to see the best prices across every month and bag a great deal.

  • Create a Price Alert for cheap tickets from HER to JTR. You don't need to check back in every day to find out if prices have fallen. We'll let you know as soon as there's a change in price.

  • Use filters to find the perfect journey for you. To see the 'Fastest,' 'Cheapest' or 'Best' flights from Heraklion Airport to Santorini International Airport, use the 'Sort by' tool. You can also filter results by departure and arrival times, airline, and number of stops.

Handy information about Heraklion Airport (HER)

  • The journey from central Heraklion to Heraklion Airport takes around 15 minutes on public transport. If you drive, ride-share or grab a cab, you'll cover the 3 kilometres in 9 minutes or so, depending on traffic.

  • Catching an early flight from Heraklion Airport to Santorini International Airport? Avoid rushing to the airport (and catch some extra z's) by picking one of these stays close to HER:

Arriving at Santorini International Airport (JTR)

  • The last thing you need is a lengthy journey to your hotel if you're getting in late on a flight from Heraklion Airport to Santorini International Airport. Check in to one of these accommodation options near JTR instead:

Getting from Santorini International Airport (JTR) to central Santorini (Thira)

  • Santorini International Airport is approximately 5 kilometres from central Santorini (Thira). With your own car rental or in a cab, the drive is about 10 minutes.

When to fly to Santorini International Airport (JTR)

  • The quietest month for a flight from Heraklion Airport to Santorini International Airport is February, while July is the busiest. Pick the best time to visit Santorini (Thira) based on whether you prefer a bustling atmosphere or a more laid-back vibe.

  • Book your flight from Heraklion Airport to Santorini International Airport for August if you want to explore Santorini (Thira) during its warmest month. Expect temperatures of between 23ºC and 27ºC.

  • Look for cheap tickets from HER to JTR in January if you like travelling in cooler conditions. Temperatures are at their lowest around then, ranging between 10ºC and 16ºC on average.

More about Santorini (Thira)

  • If you're looking for somewhere to rest your head, you can find the most popular stays in Santorini (Thira) right here. Browse these options once you've locked in your flight from HER to JTR:

  • There are so many things to see and do in this city it can be hard to work out where to start. Fira, Santorini caldera and View point on Red Beach are top attractions which should be on every Santorini (Thira) itinerary.

Complete your Santorini (Thira) trip with hotels and a car rental

  • Comparing flights is not our only party trick. After booking your cheap ticket to Santorini International Airport, check out our great car rental offers that'll give you the freedom to travel around at your own pace. Next, take a look at our exclusive rates for hotels to find your perfect Santorini (Thira) stay.

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Plan the rest of your trip from Heraklion to Santorini (Thira)

Prices shown on this page are estimated lowest prices only. Found in the last 45 days.